Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.55□□□□□ -0.56
Shmt1P50431 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.55□□□□□ -0.56
Shmt1P50431 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.55□□□□□ -0.56
Shmt1P50431 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.55□□□□□ -0.56
Shmt1P50431 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.55□□□□□ -0.56
Shmt1P50431 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.55□□□□□ -0.56
Shmt1P50431 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.55□□□□□ -0.56
Shmt1P50431 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.55□□□□□ -0.56
Shmt1P50431 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Shmt1P50431 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.55□□□□□ -0.56
Shmt1P50431 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.55□□□□□ -0.56
Shmt1P50431 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.55□□□□□ -0.56
Shmt1P50431 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shmt1P50431 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.55□□□□□ -0.56
Shmt1P50431 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.55□□□□□ -0.56
Shmt1P50431 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.54□□□□□ -0.56
Shmt1P50431 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Shmt1P50431 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Shmt1P50431 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Shmt1P50431 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.54□□□□□ -0.56
Shmt1P50431 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Shmt1P50431 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Shmt1P50431 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.54□□□□□ -0.56
Shmt1P50431 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.54□□□□□ -0.56
Shmt1P50431 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.54□□□□□ -0.56
Shmt1P50431 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Gm5700-201ENSMUST00000191483 989 ntBASIC11.54□□□□□ -0.56
Shmt1P50431 Gm6390-201ENSMUST00000215034 589 ntBASIC11.54□□□□□ -0.56
Shmt1P50431 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.54□□□□□ -0.56
Shmt1P50431 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Shmt1P50431 Gm7536-201ENSMUST00000077389 444 ntBASIC11.54□□□□□ -0.56
Shmt1P50431 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Shmt1P50431 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.54□□□□□ -0.56
Shmt1P50431 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shmt1P50431 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms