Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 AA474408-201ENSMUST00000098110 3339 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm43457-201ENSMUST00000200867 2409 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm15711-201ENSMUST00000118889 535 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Gm12380-201ENSMUST00000119012 544 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Gm11450-201ENSMUST00000121144 333 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 n-R5s14-201ENSMUST00000122688 107 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm18304-201ENSMUST00000189162 546 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm32111-201ENSMUST00000207689 846 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm7207-201ENSMUST00000211575 1067 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm43447-201ENSMUST00000198471 1535 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC8.88□□□□□ -0.99
Cdx1P18111 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Cdx1P18111 Gm18626-201ENSMUST00000221512 1409 ntBASIC8.88□□□□□ -0.99
Cdx1P18111 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cdx1P18111 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Cdx1P18111 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm4810-201ENSMUST00000177721 1607 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Cdx1P18111 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cdx1P18111 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC8.87□□□□□ -0.99
Cdx1P18111 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm22133-201ENSMUST00000102082 109 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cdx1P18111 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Gm13408-201ENSMUST00000119822 798 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm13935-201ENSMUST00000121859 798 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC8.87□□□□□ -0.99
Cdx1P18111 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC8.87□□□□□ -0.99
Cdx1P18111 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cdx1P18111 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC8.87□□□□□ -0.99
Cdx1P18111 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm42937-201ENSMUST00000197360 752 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm45118-201ENSMUST00000208928 825 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm9826-201ENSMUST00000029124 1299 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cdx1P18111 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cdx1P18111 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cdx1P18111 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Cdx1P18111 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Cdx1P18111 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cdx1P18111 AC122382.1-201ENSMUST00000225869 2371 ntBASIC8.87□□□□□ -0.99
Cdx1P18111 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms