Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC9.58□□□□□ -0.88
P04224 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
P04224 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.58□□□□□ -0.88
P04224 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.58□□□□□ -0.88
P04224 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
P04224 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
P04224 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Gm4310-201ENSMUST00000177847 889 ntBASIC9.58□□□□□ -0.88
P04224 Gm27627-201ENSMUST00000183644 150 ntBASIC9.58□□□□□ -0.88
P04224 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.58□□□□□ -0.88
P04224 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.58□□□□□ -0.88
P04224 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.58□□□□□ -0.88
P04224 Gm45224-201ENSMUST00000208203 414 ntBASIC9.58□□□□□ -0.88
P04224 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC9.58□□□□□ -0.88
P04224 Gm9797-202ENSMUST00000218003 294 ntBASIC9.58□□□□□ -0.88
P04224 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.58□□□□□ -0.88
P04224 Cts7-204ENSMUST00000225321 1257 ntBASIC9.58□□□□□ -0.88
P04224 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
P04224 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
P04224 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
P04224 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
P04224 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.58□□□□□ -0.88
P04224 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
P04224 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
P04224 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.58□□□□□ -0.88
P04224 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
P04224 AA474408-201ENSMUST00000098110 3339 ntBASIC9.57□□□□□ -0.88
P04224 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.57□□□□□ -0.88
P04224 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.57□□□□□ -0.88
P04224 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.57□□□□□ -0.88
P04224 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.57□□□□□ -0.88
P04224 Gm28686-201ENSMUST00000187404 609 ntBASIC9.57□□□□□ -0.88
P04224 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
P04224 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.57□□□□□ -0.88
P04224 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC9.57□□□□□ -0.88
P04224 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.57□□□□□ -0.88
P04224 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
P04224 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC9.57□□□□□ -0.88
P04224 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.57□□□□□ -0.88
P04224 Gm45132-201ENSMUST00000207234 2542 ntBASIC9.57□□□□□ -0.88
P04224 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.57□□□□□ -0.88
P04224 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
P04224 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms