Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CopeO89079 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.24□□□□□ -0.61
CopeO89079 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CopeO89079 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CopeO89079 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.24□□□□□ -0.61
CopeO89079 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CopeO89079 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.24□□□□□ -0.61
CopeO89079 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CopeO89079 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CopeO89079 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.24□□□□□ -0.61
CopeO89079 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CopeO89079 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CopeO89079 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CopeO89079 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.24□□□□□ -0.61
CopeO89079 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CopeO89079 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CopeO89079 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.23□□□□□ -0.61
CopeO89079 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CopeO89079 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.23□□□□□ -0.61
CopeO89079 Gm15615-201ENSMUST00000118876 198 ntBASIC11.23□□□□□ -0.61
CopeO89079 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.23□□□□□ -0.61
CopeO89079 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Gm45331-201ENSMUST00000209868 554 ntBASIC11.23□□□□□ -0.61
CopeO89079 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.23□□□□□ -0.61
CopeO89079 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.23□□□□□ -0.61
CopeO89079 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CopeO89079 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CopeO89079 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.23□□□□□ -0.61
CopeO89079 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CopeO89079 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.23□□□□□ -0.61
CopeO89079 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.23□□□□□ -0.61
CopeO89079 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.23□□□□□ -0.61
CopeO89079 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CopeO89079 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.22□□□□□ -0.61
CopeO89079 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
CopeO89079 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CopeO89079 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
CopeO89079 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.22□□□□□ -0.61
CopeO89079 Gm11450-201ENSMUST00000121144 333 ntBASIC11.22□□□□□ -0.61
CopeO89079 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.22□□□□□ -0.61
CopeO89079 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CopeO89079 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.22□□□□□ -0.61
CopeO89079 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.22□□□□□ -0.61
CopeO89079 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Gm18367-201ENSMUST00000176139 600 ntBASIC11.22□□□□□ -0.61
CopeO89079 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.22□□□□□ -0.61
CopeO89079 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.22□□□□□ -0.61
CopeO89079 AU022133-201ENSMUST00000200601 873 ntBASIC11.22□□□□□ -0.61
CopeO89079 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.22□□□□□ -0.61
CopeO89079 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.22□□□□□ -0.61
CopeO89079 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.22□□□□□ -0.61
CopeO89079 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.22□□□□□ -0.61
CopeO89079 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CopeO89079 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Gm18212-201ENSMUST00000211678 889 ntBASIC11.22□□□□□ -0.61
CopeO89079 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.22□□□□□ -0.61
CopeO89079 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CopeO89079 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.22□□□□□ -0.61
CopeO89079 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Gm9899-201ENSMUST00000065519 555 ntBASIC11.22□□□□□ -0.61
CopeO89079 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CopeO89079 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CopeO89079 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.22□□□□□ -0.61
CopeO89079 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CopeO89079 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.22□□□□□ -0.61
CopeO89079 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms