Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pknox1O70477 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pknox1O70477 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pknox1O70477 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pknox1O70477 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pknox1O70477 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pknox1O70477 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pknox1O70477 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pknox1O70477 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pknox1O70477 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pknox1O70477 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pknox1O70477 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Gm23061-201ENSMUST00000102348 116 ntBASIC10.84□□□□□ -0.67
Pknox1O70477 Gm9062-201ENSMUST00000117712 727 ntBASIC10.84□□□□□ -0.67
Pknox1O70477 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.84□□□□□ -0.67
Pknox1O70477 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Mir8115-201ENSMUST00000184992 119 ntBASIC10.84□□□□□ -0.67
Pknox1O70477 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.84□□□□□ -0.67
Pknox1O70477 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Gm30946-201ENSMUST00000198288 724 ntBASIC10.84□□□□□ -0.67
Pknox1O70477 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.84□□□□□ -0.67
Pknox1O70477 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.84□□□□□ -0.67
Pknox1O70477 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.84□□□□□ -0.67
Pknox1O70477 Spcs1-203ENSMUST00000226374 592 ntBASIC10.84□□□□□ -0.67
Pknox1O70477 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.84□□□□□ -0.67
Pknox1O70477 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.84□□□□□ -0.67
Pknox1O70477 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.84□□□□□ -0.67
Pknox1O70477 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Pknox1O70477 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pknox1O70477 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.84□□□□□ -0.67
Pknox1O70477 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pknox1O70477 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.83□□□□□ -0.68
Pknox1O70477 Gm11949-201ENSMUST00000117640 372 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 Gm9133-201ENSMUST00000118289 540 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 Gm12986-201ENSMUST00000119037 967 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Gm37905-201ENSMUST00000195310 341 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.83□□□□□ -0.68
Pknox1O70477 Gm44323-201ENSMUST00000198689 129 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Gm42859-201ENSMUST00000199572 193 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 Gm43916-201ENSMUST00000205062 967 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Mt1-202ENSMUST00000211807 1085 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.83□□□□□ -0.68
Pknox1O70477 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pknox1O70477 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Nln-205ENSMUST00000224945 2486 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms