Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Hmgb3O54879 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm11930-201ENSMUST00000117788 190 ntBASIC8.99□□□□□ -0.97
Hmgb3O54879 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm11793-201ENSMUST00000120433 981 ntBASIC8.99□□□□□ -0.97
Hmgb3O54879 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC8.99□□□□□ -0.97
Hmgb3O54879 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC8.99□□□□□ -0.97
Hmgb3O54879 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC8.99□□□□□ -0.97
Hmgb3O54879 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC8.99□□□□□ -0.97
Hmgb3O54879 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm31256-201ENSMUST00000194705 506 ntBASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm43692-201ENSMUST00000198236 1062 ntBASIC8.99□□□□□ -0.97
Hmgb3O54879 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC8.99□□□□□ -0.97
Hmgb3O54879 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 AC113082.1-201ENSMUST00000217324 327 ntBASIC8.99□□□□□ -0.97
Hmgb3O54879 Olfr1347-205ENSMUST00000220413 964 ntBASIC8.99□□□□□ -0.97
Hmgb3O54879 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Hmgb3O54879 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm37333-201ENSMUST00000192904 2251 ntBASIC8.99□□□□□ -0.97
Hmgb3O54879 Gm38043-201ENSMUST00000195501 5141 ntBASIC8.99□□□□□ -0.97
Hmgb3O54879 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Hmgb3O54879 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmgb3O54879 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Gm37120-201ENSMUST00000193350 5959 ntBASIC8.98□□□□□ -0.97
Hmgb3O54879 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Gm15207-201ENSMUST00000119259 442 ntBASIC8.98□□□□□ -0.97
Hmgb3O54879 Gm11783-201ENSMUST00000119549 885 ntBASIC8.98□□□□□ -0.97
Hmgb3O54879 Gm13786-201ENSMUST00000122371 333 ntBASIC8.98□□□□□ -0.97
Hmgb3O54879 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Gm29396-201ENSMUST00000185659 716 ntBASIC8.98□□□□□ -0.97
Hmgb3O54879 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC8.98□□□□□ -0.97
Hmgb3O54879 Gm45113-201ENSMUST00000207518 165 ntBASIC8.98□□□□□ -0.97
Hmgb3O54879 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC8.98□□□□□ -0.97
Hmgb3O54879 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC8.98□□□□□ -0.97
Hmgb3O54879 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hmgb3O54879 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Hmgb3O54879 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC8.97□□□□□ -0.97
Hmgb3O54879 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC8.97□□□□□ -0.97
Hmgb3O54879 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Hmgb3O54879 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC8.97□□□□□ -0.97
Hmgb3O54879 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmgb3O54879 Abca8a-204ENSMUST00000106664 5617 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms