Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Gm44304-201ENSMUST00000200509 145 ntBASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Gm10617-201ENSMUST00000098368 1172 ntBASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Gm25591-201ENSMUST00000177317 94 ntBASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Gm7642-201ENSMUST00000216345 1809 ntBASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc180J3QNE4 Gm6768-201ENSMUST00000022467 1878 ntBASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm6276-201ENSMUST00000120159 579 ntBASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm29157-201ENSMUST00000188753 612 ntBASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm18164-201ENSMUST00000213769 927 ntBASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm18166-201ENSMUST00000215557 927 ntBASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm11540-201ENSMUST00000117457 780 ntBASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm2716-201ENSMUST00000212350 643 ntBASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc180J3QNE4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Gm37145-201ENSMUST00000193540 2756 ntBASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Gm14735-201ENSMUST00000121772 3088 ntBASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Gm17230-201ENSMUST00000171194 3942 ntBASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Gm22582-201ENSMUST00000102283 94 ntBASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Gm24368-201ENSMUST00000175388 106 ntBASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Gm19798-201ENSMUST00000201502 457 ntBASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc180J3QNE4 Gm36987-201ENSMUST00000194704 2979 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms