Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm11701-201ENSMUST00000121277 1142 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm26379-201ENSMUST00000178125 138 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm3052-201ENSMUST00000186409 829 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 CT025689.5-201ENSMUST00000224316 986 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm8991-201ENSMUST00000073014 1075 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm7823-201ENSMUST00000120761 1623 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm8848-201ENSMUST00000197270 1343 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm11427-201ENSMUST00000117952 1696 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Scgb1b21-201ENSMUST00000170232 268 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm44139-201ENSMUST00000204903 373 ntBASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col4a6B1AVK5 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm11800-201ENSMUST00000120050 579 ntBASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm38004-201ENSMUST00000192972 357 ntBASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm17815-201ENSMUST00000198305 895 ntBASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm3889-201ENSMUST00000212467 612 ntBASIC11.03□□□□□ -0.64
Col4a6B1AVK5 AC151971.6-201ENSMUST00000216193 866 ntBASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm18749-201ENSMUST00000222410 692 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms