Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdc40Q9DC48 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Gm8302-201ENSMUST00000119217 852 ntBASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Gm12274-201ENSMUST00000120062 385 ntBASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Gm3726-201ENSMUST00000203110 785 ntBASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Cdc40Q9DC48 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.21□□□□□ -0.78
Cdc40Q9DC48 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cdc40Q9DC48 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Gm13351-201ENSMUST00000118087 414 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Gm21778-201ENSMUST00000178779 471 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Mt1-202ENSMUST00000211807 1085 ntBASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Cdc40Q9DC48 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms