Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm13665-201ENSMUST00000120830 528 ntBASIC10.15□□□□□ -0.78
Trim13Q9CYB0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm24074-201ENSMUST00000158178 260 ntBASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm37301-201ENSMUST00000195412 568 ntBASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 AC154828.2-201ENSMUST00000220908 1070 ntBASIC10.15□□□□□ -0.78
Trim13Q9CYB0 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim13Q9CYB0 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Trim13Q9CYB0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trim13Q9CYB0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trim13Q9CYB0 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trim13Q9CYB0 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.15□□□□□ -0.79
Trim13Q9CYB0 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Trim13Q9CYB0 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm23596-201ENSMUST00000104304 132 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm8566-201ENSMUST00000120174 465 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm28071-201ENSMUST00000190355 478 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm5302-201ENSMUST00000202130 796 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trim13Q9CYB0 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms