Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm42599-201ENSMUST00000201308 469 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdhga6Q91XY2 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Gm23694-201ENSMUST00000179335 110 ntBASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdhga6Q91XY2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm44106-201ENSMUST00000203153 1599 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm42432-201ENSMUST00000197902 1617 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm8302-201ENSMUST00000119217 852 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm15329-201ENSMUST00000121408 155 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm5395-201ENSMUST00000121650 915 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm4462-201ENSMUST00000166453 492 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdhga6Q91XY2 Gm24328-201ENSMUST00000175104 67 ntBASIC11□□□□□ -0.65
Pcdhga6Q91XY2 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms