Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm15617-201ENSMUST00000118973 771 ntBASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Olfml3-204ENSMUST00000169286 874 ntBASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup88Q8CEC0 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm10169-201ENSMUST00000121822 348 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm22877-201ENSMUST00000175451 105 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup88Q8CEC0 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm11573-201ENSMUST00000119956 394 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm16219-201ENSMUST00000120096 274 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm12990-201ENSMUST00000120372 468 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm17825-201ENSMUST00000206836 794 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm45856-201ENSMUST00000212752 416 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms