Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm10020-201ENSMUST00000081993 612 ntBASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Gm25076-201ENSMUST00000104098 132 ntBASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Gm9133-201ENSMUST00000118289 540 ntBASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Gm10051-201ENSMUST00000145209 414 ntBASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc38Q8CDN8 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Gm14942-201ENSMUST00000119642 336 ntBASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc38Q8CDN8 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Ccdc38Q8CDN8 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.2□□□□□ -0.46
Ccdc38Q8CDN8 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms