Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Gm34379-201ENSMUST00000195036 290 ntBASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Gm44498-201ENSMUST00000199509 111 ntBASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Gm6390-201ENSMUST00000215034 589 ntBASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Gm24089-201ENSMUST00000093696 109 ntBASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Alx1Q8C8B0 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm12337-201ENSMUST00000119634 400 ntBASIC12.73□□□□□ -0.37
Alx1Q8C8B0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm6425-201ENSMUST00000136332 790 ntBASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm22876-201ENSMUST00000175450 298 ntBASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm22877-201ENSMUST00000175451 105 ntBASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm42710-201ENSMUST00000200608 985 ntBASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.73□□□□□ -0.37
Alx1Q8C8B0 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Alx1Q8C8B0 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.72□□□□□ -0.37
Alx1Q8C8B0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm11675-201ENSMUST00000121873 832 ntBASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm22146-201ENSMUST00000157397 288 ntBASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm5801-201ENSMUST00000182247 780 ntBASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Mir6958-201ENSMUST00000184207 73 ntBASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms