Protein–RNA interactions for Protein: Q810U5

Ccdc50, Coiled-coil domain-containing protein 50, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50Q810U5 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc50Q810U5 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ccdc50Q810U5 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc50Q810U5 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc50Q810U5 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
Ccdc50Q810U5 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc50Q810U5 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc50Q810U5 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.79□□□□□ -0.68
Ccdc50Q810U5 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccdc50Q810U5 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm19972-201ENSMUST00000218180 5664 ntBASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm23270-201ENSMUST00000104055 131 ntBASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm5070-201ENSMUST00000177599 862 ntBASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm27501-201ENSMUST00000183599 107 ntBASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm10478-201ENSMUST00000084451 396 ntBASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc50Q810U5 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Ccdc50Q810U5 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc50Q810U5 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc50Q810U5 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc50Q810U5 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc50Q810U5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc50Q810U5 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc50Q810U5 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Gm31256-201ENSMUST00000194705 506 ntBASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Gm31941-201ENSMUST00000209689 350 ntBASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccdc50Q810U5 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms