Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Snord23-201ENSMUST00000116828 109 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm14201-201ENSMUST00000117627 289 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm13019-201ENSMUST00000120000 276 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm3828-201ENSMUST00000121817 257 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm6390-201ENSMUST00000215034 589 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm5178-201ENSMUST00000219380 898 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm26670-202ENSMUST00000226862 340 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Mir483-201ENSMUST00000093631 73 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm25562-201ENSMUST00000104608 133 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm11801-201ENSMUST00000117807 746 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm14126-201ENSMUST00000122345 395 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm22993-201ENSMUST00000175423 254 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 AC124457.1-201ENSMUST00000198845 120 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm18463-201ENSMUST00000207258 474 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm18460-201ENSMUST00000208088 464 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm7589-201ENSMUST00000085631 534 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Gm45657-201ENSMUST00000211318 1349 ntBASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh19Q80TF3 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms