Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm43186-201ENSMUST00000198130 824 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm44044-201ENSMUST00000205178 1089 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm8385-201ENSMUST00000058999 643 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm45251-201ENSMUST00000209486 1465 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scaf4Q6PFF0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scaf4Q6PFF0 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Scaf4Q6PFF0 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.77□□□□□ -0.68
Scaf4Q6PFF0 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Scaf4Q6PFF0 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Scaf4Q6PFF0 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Scaf4Q6PFF0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.77□□□□□ -0.68
Scaf4Q6PFF0 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Gm16219-201ENSMUST00000120096 274 ntBASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Gm9089-201ENSMUST00000122027 526 ntBASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scaf4Q6PFF0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms