Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm4909-201ENSMUST00000118749 794 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm8302-201ENSMUST00000119217 852 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm28450-201ENSMUST00000187349 638 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm29067-201ENSMUST00000190821 470 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm25125-201ENSMUST00000083340 136 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Olfr584-201ENSMUST00000098210 964 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm16219-201ENSMUST00000120096 274 ntBASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm27441-201ENSMUST00000185000 105 ntBASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm37981-201ENSMUST00000194280 535 ntBASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm19208-201ENSMUST00000213861 912 ntBASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smarcd3Q6P9Z1 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms