Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Mir1956-201ENSMUST00000157748 65 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Gm44545-201ENSMUST00000208262 746 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Gm30671-201ENSMUST00000214898 318 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Casc4Q6P2L7 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm8197-202ENSMUST00000193422 934 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm42816-201ENSMUST00000198433 325 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm45594-201ENSMUST00000211717 241 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Casc4Q6P2L7 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms