Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC14.06□□□□□ -0.16
Clcn1Q64347 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Clcn1Q64347 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 Gm8502-201ENSMUST00000185708 901 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 Gm8510-201ENSMUST00000189202 895 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 Gm2316-201ENSMUST00000190613 921 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 Gm19918-201ENSMUST00000194858 400 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 Gm37709-201ENSMUST00000195074 600 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clcn1Q64347 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 BC080696-201ENSMUST00000202858 1218 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clcn1Q64347 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.06□□□□□ -0.16
Clcn1Q64347 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 CT030652.1-201ENSMUST00000227377 1235 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 AC158986.2-201ENSMUST00000227487 618 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 AC169511.1-201ENSMUST00000227639 995 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Clcn1Q64347 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Gm10020-201ENSMUST00000081993 612 ntBASIC14.06□□□□□ -0.16
Clcn1Q64347 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clcn1Q64347 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC14.06□□□□□ -0.16
Clcn1Q64347 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.06□□□□□ -0.16
Clcn1Q64347 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clcn1Q64347 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Clcn1Q64347 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Clcn1Q64347 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Clcn1Q64347 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Gm12986-201ENSMUST00000119037 967 ntBASIC14.05□□□□□ -0.16
Clcn1Q64347 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Gm23675-201ENSMUST00000157311 125 ntBASIC14.05□□□□□ -0.16
Clcn1Q64347 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC14.05□□□□□ -0.16
Clcn1Q64347 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC14.05□□□□□ -0.16
Clcn1Q64347 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.05□□□□□ -0.16
Clcn1Q64347 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 AC159196.1-201ENSMUST00000225524 377 ntBASIC14.05□□□□□ -0.16
Clcn1Q64347 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Gm6478-201ENSMUST00000099450 742 ntBASIC14.05□□□□□ -0.16
Clcn1Q64347 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 AC022682.1-201ENSMUST00000224624 2023 ntBASIC14.05□□□□□ -0.16
Clcn1Q64347 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.05□□□□□ -0.16
Clcn1Q64347 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcn1Q64347 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clcn1Q64347 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Clcn1Q64347 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm22344-201ENSMUST00000122642 278 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm26119-201ENSMUST00000175601 104 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm7069-201ENSMUST00000182418 1008 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm27440-201ENSMUST00000184785 107 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcn1Q64347 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm44251-201ENSMUST00000204963 442 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcn1Q64347 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 AC164556.1-201ENSMUST00000221318 751 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 AC174797.2-201ENSMUST00000225835 165 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms