Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gm3329-201ENSMUST00000159873 556 ntBASIC8.95□□□□□ -0.98
Trim63Q38HM4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gm27331-201ENSMUST00000183705 60 ntBASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gm27397-201ENSMUST00000184997 107 ntBASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gm40332-201ENSMUST00000199847 938 ntBASIC8.95□□□□□ -0.98
Trim63Q38HM4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC8.95□□□□□ -0.98
Trim63Q38HM4 AC141438.2-201ENSMUST00000215068 271 ntBASIC8.95□□□□□ -0.98
Trim63Q38HM4 AC152922.1-201ENSMUST00000216518 1232 ntBASIC8.95□□□□□ -0.98
Trim63Q38HM4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 AC137950.3-201ENSMUST00000228250 246 ntBASIC8.95□□□□□ -0.98
Trim63Q38HM4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Tsr2-202ENSMUST00000112683 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Plod1-201ENSMUST00000019199 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Pcdh1-201ENSMUST00000057185 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Synj2-207ENSMUST00000115788 3498 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Scfd2-208ENSMUST00000151474 3834 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Bfar-202ENSMUST00000069281 2456 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm26710-201ENSMUST00000181265 1793 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Aqp7-201ENSMUST00000030136 2527 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm8314-201ENSMUST00000208964 1858 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Slco4c1-201ENSMUST00000071985 4908 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Ankk1-201ENSMUST00000034792 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Sh3rf1-202ENSMUST00000209611 4416 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm12341-201ENSMUST00000119724 503 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm14822-201ENSMUST00000122247 291 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm11594-201ENSMUST00000122313 162 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm27702-201ENSMUST00000184512 56 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm38321-201ENSMUST00000195053 235 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 AC151286.1-201ENSMUST00000198489 145 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Mid1-205ENSMUST00000112105 3974 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Gm45768-201ENSMUST00000206763 3202 ntBASIC8.94□□□□□ -0.98
Trim63Q38HM4 Dnajc14-201ENSMUST00000026410 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Baiap3-201ENSMUST00000169109 3630 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim63Q38HM4 Zfp385b-201ENSMUST00000090766 2740 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms