Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm10113-201ENSMUST00000072437 3150 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Hpx-201ENSMUST00000033185 1499 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 2310040G07Rik-201ENSMUST00000101090 478 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Mfap5-202ENSMUST00000118626 748 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Mir7659-201ENSMUST00000184079 58 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 AC158531.2-201ENSMUST00000224264 473 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm16575-201ENSMUST00000162186 1615 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm20642-201ENSMUST00000177185 1512 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 AC140299.1-201ENSMUST00000217855 1510 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm19337-201ENSMUST00000218100 1584 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm42974-201ENSMUST00000199556 2654 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm5975-201ENSMUST00000185256 1399 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm16330-201ENSMUST00000128324 297 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm11377-201ENSMUST00000131539 670 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm15942-201ENSMUST00000136305 810 ntTSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Snca-202ENSMUST00000163779 1188 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Mir5100-201ENSMUST00000174993 64 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Ccdc190-202ENSMUST00000175731 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 AC133156.2-201ENSMUST00000226865 784 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm8256-202ENSMUST00000227964 828 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 1700012A03Rik-201ENSMUST00000031778 918 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Kbtbd4-202ENSMUST00000111464 2343 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Crp-201ENSMUST00000038495 1695 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Mageb2-201ENSMUST00000101397 1143 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Rhox12-202ENSMUST00000115146 561 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm8310-201ENSMUST00000117526 1193 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm11700-201ENSMUST00000119409 403 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Kcnd3os-202ENSMUST00000143893 718 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm26208-201ENSMUST00000158677 124 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 1700049E22Rik-201ENSMUST00000187986 507 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm18492-201ENSMUST00000198141 1018 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm44331-201ENSMUST00000203217 388 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 CT009494.1-201ENSMUST00000225121 1213 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Cd2-201ENSMUST00000029456 1153 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Mageb1-201ENSMUST00000072269 1143 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Mageb1-202ENSMUST00000099471 993 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm37909-201ENSMUST00000193157 2159 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm43127-201ENSMUST00000195890 2789 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm14147-202ENSMUST00000178211 1923 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm45170-201ENSMUST00000206746 1671 ntBASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ush2AQ2QI47 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms