Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H3f3aP84244 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
H3f3aP84244 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
H3f3aP84244 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H3f3aP84244 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
H3f3aP84244 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
H3f3aP84244 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
H3f3aP84244 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.77□□□□□ -0.84
H3f3aP84244 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
H3f3aP84244 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
H3f3aP84244 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
H3f3aP84244 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
H3f3aP84244 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
H3f3aP84244 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
H3f3aP84244 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Gm14665-201ENSMUST00000122294 557 ntBASIC9.77□□□□□ -0.85
H3f3aP84244 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC9.77□□□□□ -0.85
H3f3aP84244 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.77□□□□□ -0.85
H3f3aP84244 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.77□□□□□ -0.85
H3f3aP84244 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.77□□□□□ -0.85
H3f3aP84244 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.77□□□□□ -0.85
H3f3aP84244 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.77□□□□□ -0.85
H3f3aP84244 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Gm37301-201ENSMUST00000195412 568 ntBASIC9.77□□□□□ -0.85
H3f3aP84244 Gm34023-201ENSMUST00000195539 217 ntBASIC9.77□□□□□ -0.85
H3f3aP84244 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.77□□□□□ -0.85
H3f3aP84244 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 AC166341.2-201ENSMUST00000220571 120 ntBASIC9.77□□□□□ -0.85
H3f3aP84244 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.77□□□□□ -0.85
H3f3aP84244 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
H3f3aP84244 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
H3f3aP84244 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
H3f3aP84244 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
H3f3aP84244 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H3f3aP84244 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
H3f3aP84244 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H3f3aP84244 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
H3f3aP84244 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
H3f3aP84244 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H3f3aP84244 Mir453-201ENSMUST00000104732 82 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.76□□□□□ -0.85
H3f3aP84244 Gm14270-201ENSMUST00000118388 846 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Gm13019-201ENSMUST00000120000 276 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H3f3aP84244 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.76□□□□□ -0.85
H3f3aP84244 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.76□□□□□ -0.85
H3f3aP84244 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.76□□□□□ -0.85
H3f3aP84244 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.76□□□□□ -0.85
H3f3aP84244 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H3f3aP84244 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H3f3aP84244 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
H3f3aP84244 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
H3f3aP84244 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Mir6998-201ENSMUST00000183343 64 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Gm7255-201ENSMUST00000187371 908 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Gm3017-201ENSMUST00000203603 1126 ntBASIC9.76□□□□□ -0.85
H3f3aP84244 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
H3f3aP84244 Gm7525-201ENSMUST00000219425 454 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms