Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.16□□□□□ -0.3
Rad50P70388 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.16□□□□□ -0.3
Rad50P70388 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.16□□□□□ -0.3
Rad50P70388 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Gm25125-201ENSMUST00000083340 136 ntBASIC13.16□□□□□ -0.3
Rad50P70388 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rad50P70388 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.16□□□□□ -0.3
Rad50P70388 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Rad50P70388 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.16□□□□□ -0.3
Rad50P70388 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rad50P70388 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Rad50P70388 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rad50P70388 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Rad50P70388 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rad50P70388 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.15□□□□□ -0.3
Rad50P70388 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.15□□□□□ -0.3
Rad50P70388 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.15□□□□□ -0.3
Rad50P70388 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.15□□□□□ -0.3
Rad50P70388 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.15□□□□□ -0.3
Rad50P70388 Gm28833-201ENSMUST00000189671 559 ntBASIC13.15□□□□□ -0.3
Rad50P70388 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rad50P70388 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.15□□□□□ -0.3
Rad50P70388 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Mir483-201ENSMUST00000093631 73 ntBASIC13.15□□□□□ -0.3
Rad50P70388 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC13.15□□□□□ -0.3
Rad50P70388 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rad50P70388 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Rad50P70388 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Rad50P70388 Hyal2-206ENSMUST00000195681 2968 ntBASIC13.15□□□□□ -0.3
Rad50P70388 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rad50P70388 Gm42851-201ENSMUST00000201325 1411 ntBASIC13.15□□□□□ -0.3
Rad50P70388 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rad50P70388 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC13.15□□□□□ -0.3
Rad50P70388 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.15□□□□□ -0.3
Rad50P70388 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rad50P70388 Gm6768-201ENSMUST00000022467 1878 ntBASIC13.15□□□□□ -0.31
Rad50P70388 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
Rad50P70388 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rad50P70388 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rad50P70388 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rad50P70388 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.14□□□□□ -0.31
Rad50P70388 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rad50P70388 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rad50P70388 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rad50P70388 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rad50P70388 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rad50P70388 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.14□□□□□ -0.31
Rad50P70388 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.14□□□□□ -0.31
Rad50P70388 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rad50P70388 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rad50P70388 Snord55-201ENSMUST00000174939 79 ntBASIC13.14□□□□□ -0.31
Rad50P70388 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.14□□□□□ -0.31
Rad50P70388 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rad50P70388 Gm37597-201ENSMUST00000191853 382 ntBASIC13.14□□□□□ -0.31
Rad50P70388 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rad50P70388 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC13.14□□□□□ -0.31
Rad50P70388 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.14□□□□□ -0.31
Rad50P70388 Gm35713-201ENSMUST00000210516 199 ntBASIC13.14□□□□□ -0.31
Rad50P70388 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.14□□□□□ -0.31
Rad50P70388 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.14□□□□□ -0.31
Rad50P70388 Gm18514-201ENSMUST00000218980 436 ntBASIC13.14□□□□□ -0.31
Rad50P70388 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.14□□□□□ -0.31
Rad50P70388 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rad50P70388 Gm16380-201ENSMUST00000077997 478 ntBASIC13.14□□□□□ -0.31
Rad50P70388 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rad50P70388 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms