Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.13□□□□□ -0.47
Hmgb1P63158 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Gm11956-201ENSMUST00000119525 512 ntBASIC12.13□□□□□ -0.47
Hmgb1P63158 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hmgb1P63158 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.13□□□□□ -0.47
Hmgb1P63158 Gm38321-201ENSMUST00000195053 235 ntBASIC12.13□□□□□ -0.47
Hmgb1P63158 Gm45398-201ENSMUST00000210561 165 ntBASIC12.13□□□□□ -0.47
Hmgb1P63158 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmgb1P63158 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.13□□□□□ -0.47
Hmgb1P63158 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.13□□□□□ -0.47
Hmgb1P63158 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmgb1P63158 Gm9220-201ENSMUST00000190721 2544 ntBASIC12.13□□□□□ -0.47
Hmgb1P63158 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.13□□□□□ -0.47
Hmgb1P63158 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Hmgb1P63158 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.13□□□□□ -0.47
Hmgb1P63158 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Hmgb1P63158 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmgb1P63158 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.12□□□□□ -0.47
Hmgb1P63158 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.12□□□□□ -0.47
Hmgb1P63158 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Fam32a-201ENSMUST00000003123 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Gm15236-201ENSMUST00000117309 379 ntBASIC12.12□□□□□ -0.47
Hmgb1P63158 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Gm29199-201ENSMUST00000187766 775 ntBASIC12.12□□□□□ -0.47
Hmgb1P63158 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Gm45289-201ENSMUST00000211048 2577 ntBASIC12.12□□□□□ -0.47
Hmgb1P63158 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgb1P63158 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgb1P63158 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm38014-201ENSMUST00000193349 2612 ntBASIC12.11□□□□□ -0.47
Hmgb1P63158 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Hmgb1P63158 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm13045-201ENSMUST00000119019 712 ntBASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm7985-201ENSMUST00000183329 981 ntBASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm28746-201ENSMUST00000187453 380 ntBASIC12.11□□□□□ -0.47
Hmgb1P63158 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms