Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.87□□□□□ -0.83
Lsm3P62311 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Lsm3P62311 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Lsm3P62311 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Lsm3P62311 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Lsm3P62311 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Lsm3P62311 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Lsm3P62311 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Lsm3P62311 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Lsm3P62311 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Lsm3P62311 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 Gm43962-201ENSMUST00000203898 190 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC9.86□□□□□ -0.83
Lsm3P62311 Gm45856-201ENSMUST00000212752 416 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Lsm3P62311 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.86□□□□□ -0.83
Lsm3P62311 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Lsm3P62311 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.86□□□□□ -0.83
Lsm3P62311 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Lsm3P62311 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.85□□□□□ -0.83
Lsm3P62311 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Far1-211ENSMUST00000164745 3972 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Gm11478-201ENSMUST00000117851 599 ntBASIC9.85□□□□□ -0.83
Lsm3P62311 Gm15264-201ENSMUST00000118050 502 ntBASIC9.85□□□□□ -0.83
Lsm3P62311 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Lsm3P62311 Gm37424-201ENSMUST00000191727 561 ntBASIC9.85□□□□□ -0.83
Lsm3P62311 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.85□□□□□ -0.83
Lsm3P62311 Gm38158-201ENSMUST00000194617 339 ntBASIC9.85□□□□□ -0.83
Lsm3P62311 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.85□□□□□ -0.83
Lsm3P62311 Gm42867-201ENSMUST00000202995 469 ntBASIC9.85□□□□□ -0.83
Lsm3P62311 Gm19187-201ENSMUST00000206781 892 ntBASIC9.85□□□□□ -0.83
Lsm3P62311 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lsm3P62311 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.85□□□□□ -0.83
Lsm3P62311 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms