Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mir8109-201ENSMUST00000184375 117 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.17□□□□□ -0.46
Tpm1P58771 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.17□□□□□ -0.46
Tpm1P58771 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm37666-201ENSMUST00000194110 866 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm44262-201ENSMUST00000204969 372 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.17□□□□□ -0.46
Tpm1P58771 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Gm22042-201ENSMUST00000082989 165 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Gm26110-201ENSMUST00000083971 165 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Gm44888-201ENSMUST00000209119 2541 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Tpm1P58771 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tpm1P58771 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.17□□□□□ -0.46
Tpm1P58771 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Tpm1P58771 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tpm1P58771 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Gm21115-201ENSMUST00000187565 2578 ntBASIC12.16□□□□□ -0.46
Tpm1P58771 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Gm23061-201ENSMUST00000102348 116 ntBASIC12.16□□□□□ -0.46
Tpm1P58771 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Tpm1P58771 Gm14130-201ENSMUST00000118417 987 ntBASIC12.16□□□□□ -0.46
Tpm1P58771 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.16□□□□□ -0.46
Tpm1P58771 Gm15549-201ENSMUST00000121595 622 ntBASIC12.16□□□□□ -0.46
Tpm1P58771 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tpm1P58771 Gm3150-201ENSMUST00000166418 204 ntBASIC12.16□□□□□ -0.46
Tpm1P58771 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tpm1P58771 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tpm1P58771 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tpm1P58771 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tpm1P58771 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.16□□□□□ -0.46
Tpm1P58771 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Tpm1P58771 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Tpm1P58771 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tpm1P58771 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Tpm1P58771 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC12.16□□□□□ -0.46
Tpm1P58771 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tpm1P58771 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tpm1P58771 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC12.15□□□□□ -0.46
Tpm1P58771 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.15□□□□□ -0.46
Tpm1P58771 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tpm1P58771 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Gm11941-201ENSMUST00000119904 610 ntBASIC12.15□□□□□ -0.46
Tpm1P58771 Gm25668-201ENSMUST00000157700 129 ntBASIC12.15□□□□□ -0.46
Tpm1P58771 Gm23085-201ENSMUST00000157849 293 ntBASIC12.15□□□□□ -0.46
Tpm1P58771 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC12.15□□□□□ -0.46
Tpm1P58771 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.15□□□□□ -0.46
Tpm1P58771 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.15□□□□□ -0.46
Tpm1P58771 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.15□□□□□ -0.46
Tpm1P58771 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.15□□□□□ -0.46
Tpm1P58771 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.15□□□□□ -0.46
Tpm1P58771 Mir7085-201ENSMUST00000184353 66 ntBASIC12.15□□□□□ -0.46
Tpm1P58771 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms