Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm5468-202ENSMUST00000227851 682 ntBASIC11.18□□□□□ -0.62
SftpbP50405 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SftpbP50405 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SftpbP50405 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SftpbP50405 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SftpbP50405 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SftpbP50405 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SftpbP50405 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.17□□□□□ -0.62
SftpbP50405 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.17□□□□□ -0.62
SftpbP50405 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.17□□□□□ -0.62
SftpbP50405 Gm11956-201ENSMUST00000119525 512 ntBASIC11.17□□□□□ -0.62
SftpbP50405 Gm16219-201ENSMUST00000120096 274 ntBASIC11.17□□□□□ -0.62
SftpbP50405 Gm22144-201ENSMUST00000157402 102 ntBASIC11.17□□□□□ -0.62
SftpbP50405 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.17□□□□□ -0.62
SftpbP50405 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Gm44315-201ENSMUST00000203041 219 ntBASIC11.17□□□□□ -0.62
SftpbP50405 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.17□□□□□ -0.62
SftpbP50405 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.17□□□□□ -0.62
SftpbP50405 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SftpbP50405 Spata33-207ENSMUST00000212760 4074 ntBASIC11.17□□□□□ -0.62
SftpbP50405 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SftpbP50405 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SftpbP50405 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SftpbP50405 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.16□□□□□ -0.62
SftpbP50405 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.16□□□□□ -0.62
SftpbP50405 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SftpbP50405 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.16□□□□□ -0.62
SftpbP50405 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.16□□□□□ -0.62
SftpbP50405 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
SftpbP50405 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
SftpbP50405 Gm15352-201ENSMUST00000118696 270 ntBASIC11.16□□□□□ -0.62
SftpbP50405 Gm8302-201ENSMUST00000119217 852 ntBASIC11.16□□□□□ -0.62
SftpbP50405 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.16□□□□□ -0.62
SftpbP50405 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.16□□□□□ -0.62
SftpbP50405 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 Gm4654-201ENSMUST00000183305 982 ntBASIC11.16□□□□□ -0.62
SftpbP50405 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.16□□□□□ -0.62
SftpbP50405 Gm38321-201ENSMUST00000195053 235 ntBASIC11.16□□□□□ -0.62
SftpbP50405 Gm37301-201ENSMUST00000195412 568 ntBASIC11.16□□□□□ -0.62
SftpbP50405 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
SftpbP50405 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SftpbP50405 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.16□□□□□ -0.62
SftpbP50405 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SftpbP50405 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 1442.8 ms