Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.53□□□□□ -0.88
UbbP0CG49 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.53□□□□□ -0.88
UbbP0CG49 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UbbP0CG49 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
UbbP0CG49 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UbbP0CG49 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UbbP0CG49 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UbbP0CG49 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.88
UbbP0CG49 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
UbbP0CG49 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.88
UbbP0CG49 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
UbbP0CG49 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
UbbP0CG49 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
UbbP0CG49 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
UbbP0CG49 Gm8731-201ENSMUST00000118088 412 ntBASIC9.52□□□□□ -0.89
UbbP0CG49 Gm8302-201ENSMUST00000119217 852 ntBASIC9.52□□□□□ -0.89
UbbP0CG49 Gm8199-201ENSMUST00000121323 823 ntBASIC9.52□□□□□ -0.89
UbbP0CG49 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
UbbP0CG49 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
UbbP0CG49 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.52□□□□□ -0.89
UbbP0CG49 Gm37284-201ENSMUST00000193607 539 ntBASIC9.52□□□□□ -0.89
UbbP0CG49 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.52□□□□□ -0.89
UbbP0CG49 Gm44506-201ENSMUST00000206278 965 ntBASIC9.52□□□□□ -0.89
UbbP0CG49 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Gm9111-201ENSMUST00000219394 709 ntBASIC9.52□□□□□ -0.89
UbbP0CG49 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.52□□□□□ -0.89
UbbP0CG49 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
UbbP0CG49 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
UbbP0CG49 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.52□□□□□ -0.89
UbbP0CG49 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.52□□□□□ -0.89
UbbP0CG49 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
UbbP0CG49 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UbbP0CG49 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.52□□□□□ -0.89
UbbP0CG49 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
UbbP0CG49 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
UbbP0CG49 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.51□□□□□ -0.89
UbbP0CG49 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
UbbP0CG49 Gm14127-201ENSMUST00000117906 678 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Gm16219-201ENSMUST00000120096 274 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Gm15566-201ENSMUST00000121130 590 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.51□□□□□ -0.89
UbbP0CG49 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.51□□□□□ -0.89
UbbP0CG49 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
UbbP0CG49 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Gm27530-201ENSMUST00000184096 98 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Gm28746-201ENSMUST00000187453 380 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Gm42859-201ENSMUST00000199572 193 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Gm6082-201ENSMUST00000215204 454 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC9.51□□□□□ -0.89
UbbP0CG49 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.51□□□□□ -0.89
UbbP0CG49 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UbbP0CG49 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms