Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gm15197-201ENSMUST00000120526 478 ntBASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gm42867-201ENSMUST00000202995 469 ntBASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gm23680-201ENSMUST00000083162 164 ntBASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp6P0C0A3 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm19246-201ENSMUST00000173599 255 ntBASIC11.94□□□□□ -0.5
Chmp6P0C0A3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm8531-201ENSMUST00000188319 893 ntBASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chmp6P0C0A3 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp6P0C0A3 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms