Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc180J3QNE4 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc180J3QNE4 AC132384.2-201ENSMUST00000218018 526 ntBASIC19.74■□□□□ 0.75
Ccdc180J3QNE4 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc180J3QNE4 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc180J3QNE4 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm29101-201ENSMUST00000188329 1471 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm23132-201ENSMUST00000104254 132 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm14370-201ENSMUST00000122460 868 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm15273-201ENSMUST00000142302 868 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm7023-201ENSMUST00000147295 868 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm14357-201ENSMUST00000178352 868 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm14361-201ENSMUST00000178547 868 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm14348-201ENSMUST00000179183 868 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm5543-201ENSMUST00000193329 1091 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Gm10537-201ENSMUST00000192625 1698 ntBASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc180J3QNE4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Gm18466-201ENSMUST00000209147 499 ntBASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 AC124561.1-202ENSMUST00000228652 1929 ntBASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Paupar-201ENSMUST00000194826 3482 ntBASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc180J3QNE4 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm22876-201ENSMUST00000175450 298 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm7539-201ENSMUST00000189789 630 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm8730-201ENSMUST00000076373 954 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm5697-201ENSMUST00000122295 2482 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 AC149588.2-201ENSMUST00000228182 1859 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm37969-201ENSMUST00000195777 3409 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm7805-201ENSMUST00000154348 448 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm8022-201ENSMUST00000191763 904 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm43866-201ENSMUST00000203894 839 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm44917-201ENSMUST00000208798 520 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm45308-201ENSMUST00000210610 415 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 Mir194-2-201ENSMUST00000083648 86 ntBASIC19.71■□□□□ 0.75
Ccdc180J3QNE4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Gm45496-201ENSMUST00000209918 2917 ntBASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc180J3QNE4 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms