Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm6939-201ENSMUST00000122029 864 ntBASIC13.28□□□□□ -0.28
NpcdF8VQB8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Snord55-201ENSMUST00000174939 79 ntBASIC13.28□□□□□ -0.28
NpcdF8VQB8 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Gm42689-201ENSMUST00000202403 404 ntBASIC13.28□□□□□ -0.28
NpcdF8VQB8 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Gm29689-201ENSMUST00000221076 589 ntBASIC13.28□□□□□ -0.28
NpcdF8VQB8 AC133496.1-201ENSMUST00000223891 743 ntBASIC13.28□□□□□ -0.28
NpcdF8VQB8 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Gm8873-201ENSMUST00000217847 1439 ntBASIC13.28□□□□□ -0.28
NpcdF8VQB8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NpcdF8VQB8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.27□□□□□ -0.28
NpcdF8VQB8 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NpcdF8VQB8 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Mir1190-201ENSMUST00000116925 96 ntBASIC13.27□□□□□ -0.29
NpcdF8VQB8 Gm14829-201ENSMUST00000121499 1138 ntBASIC13.27□□□□□ -0.29
NpcdF8VQB8 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Gm19324-201ENSMUST00000213229 1169 ntBASIC13.27□□□□□ -0.29
NpcdF8VQB8 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC13.27□□□□□ -0.29
NpcdF8VQB8 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC13.27□□□□□ -0.29
NpcdF8VQB8 AC133517.1-201ENSMUST00000225825 594 ntBASIC13.27□□□□□ -0.29
NpcdF8VQB8 CT030195.2-201ENSMUST00000226074 1286 ntBASIC13.27□□□□□ -0.29
NpcdF8VQB8 AC101205.2-201ENSMUST00000226206 715 ntBASIC13.27□□□□□ -0.29
NpcdF8VQB8 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Gm9701-201ENSMUST00000077976 427 ntBASIC13.27□□□□□ -0.29
NpcdF8VQB8 Gm22341-201ENSMUST00000083775 129 ntBASIC13.27□□□□□ -0.29
NpcdF8VQB8 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.27□□□□□ -0.29
NpcdF8VQB8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.27□□□□□ -0.29
NpcdF8VQB8 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.26□□□□□ -0.29
NpcdF8VQB8 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gm7061-201ENSMUST00000118127 1416 ntBASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.26□□□□□ -0.29
NpcdF8VQB8 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gm8707-201ENSMUST00000183325 980 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms