Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Gm12887B1AVM1 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm12887B1AVM1 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm12887B1AVM1 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm12887B1AVM1 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Gm12887B1AVM1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm12887B1AVM1 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC8.79□□□□□ -1
Gm12887B1AVM1 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm8111-201ENSMUST00000117659 987 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm11425-201ENSMUST00000119608 498 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm29615-201ENSMUST00000185371 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm28224-201ENSMUST00000186078 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm29001-201ENSMUST00000186177 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm28292-201ENSMUST00000186593 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm28101-201ENSMUST00000187608 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm29076-201ENSMUST00000187689 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm28302-201ENSMUST00000187931 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm28646-201ENSMUST00000188220 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm28205-201ENSMUST00000189177 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm3332-201ENSMUST00000189337 928 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm29032-201ENSMUST00000189797 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm28695-201ENSMUST00000190300 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm37448-201ENSMUST00000192795 697 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm6108-201ENSMUST00000208365 367 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm18615-201ENSMUST00000222919 1031 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 AC118639.2-201ENSMUST00000226289 223 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Gm9396-201ENSMUST00000076703 567 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC8.78□□□□□ -1
Gm12887B1AVM1 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm12887B1AVM1 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Gm12887B1AVM1 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Gm12887B1AVM1 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Gm12887B1AVM1 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Gm12887B1AVM1 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Gm12887B1AVM1 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC8.77□□□□□ -1
Gm12887B1AVM1 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Gm12887B1AVM1 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC8.77□□□□□ -1
Gm12887B1AVM1 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC8.77□□□□□ -1
Gm12887B1AVM1 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Gm12887B1AVM1 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Gm12887B1AVM1 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Gm19972-201ENSMUST00000218180 5664 ntBASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Gm9220-201ENSMUST00000190721 2544 ntBASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm12887B1AVM1 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Gm15824-201ENSMUST00000119516 955 ntBASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Mir1982-201ENSMUST00000157368 74 ntBASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC8.77□□□□□ -1.01
Gm12887B1AVM1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms