Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5493S4R2D1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm5493S4R2D1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.02■□□□□ 0.31
Gm5493S4R2D1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm5493S4R2D1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm5493S4R2D1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm5493S4R2D1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.01■□□□□ 0.31
Gm5493S4R2D1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Gm5493S4R2D1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Gm5493S4R2D1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17■□□□□ 0.31
Gm5493S4R2D1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17■□□□□ 0.31
Gm5493S4R2D1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17■□□□□ 0.31
Gm5493S4R2D1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Gm5493S4R2D1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5493S4R2D1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5493S4R2D1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5493S4R2D1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm5493S4R2D1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm5493S4R2D1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm5493S4R2D1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.96■□□□□ 0.31
Gm5493S4R2D1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm5493S4R2D1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm5493S4R2D1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm5493S4R2D1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Gm5493S4R2D1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm5493S4R2D1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm5493S4R2D1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Gm5493S4R2D1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Gm5493S4R2D1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm5493S4R2D1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm5493S4R2D1 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.95■□□□□ 0.3
Gm5493S4R2D1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm5493S4R2D1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm5493S4R2D1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Gm5493S4R2D1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm5493S4R2D1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm5493S4R2D1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5493S4R2D1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5493S4R2D1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5493S4R2D1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5493S4R2D1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.94■□□□□ 0.3
Gm5493S4R2D1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5493S4R2D1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5493S4R2D1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5493S4R2D1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms