Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mrpl40Q9Z2Q5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mrpl40Q9Z2Q5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mrpl40Q9Z2Q5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mrpl40Q9Z2Q5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Mrpl40Q9Z2Q5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mrpl40Q9Z2Q5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mrpl40Q9Z2Q5 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.98■□□□□ 0.79
Mrpl40Q9Z2Q5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mrpl40Q9Z2Q5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Mrpl40Q9Z2Q5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mrpl40Q9Z2Q5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mrpl40Q9Z2Q5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mrpl40Q9Z2Q5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mrpl40Q9Z2Q5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Mrpl40Q9Z2Q5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mrpl40Q9Z2Q5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mrpl40Q9Z2Q5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.95■□□□□ 0.78
Mrpl40Q9Z2Q5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mrpl40Q9Z2Q5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mrpl40Q9Z2Q5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Mrpl40Q9Z2Q5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mrpl40Q9Z2Q5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Mrpl40Q9Z2Q5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.95■□□□□ 0.78
Mrpl40Q9Z2Q5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mrpl40Q9Z2Q5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mrpl40Q9Z2Q5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mrpl40Q9Z2Q5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Mrpl40Q9Z2Q5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mrpl40Q9Z2Q5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mrpl40Q9Z2Q5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mrpl40Q9Z2Q5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mrpl40Q9Z2Q5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mrpl40Q9Z2Q5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mrpl40Q9Z2Q5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Mrpl40Q9Z2Q5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mrpl40Q9Z2Q5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Mrpl40Q9Z2Q5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mrpl40Q9Z2Q5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Mrpl40Q9Z2Q5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.9■□□□□ 0.78
Mrpl40Q9Z2Q5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Mrpl40Q9Z2Q5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mrpl40Q9Z2Q5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mrpl40Q9Z2Q5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms