Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Crlf3Q9Z2L7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Crlf3Q9Z2L7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Crlf3Q9Z2L7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.25■□□□□ 0.83
Crlf3Q9Z2L7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crlf3Q9Z2L7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.25■□□□□ 0.83
Crlf3Q9Z2L7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crlf3Q9Z2L7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.25■□□□□ 0.83
Crlf3Q9Z2L7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crlf3Q9Z2L7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Crlf3Q9Z2L7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf3Q9Z2L7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Crlf3Q9Z2L7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.24■□□□□ 0.83
Crlf3Q9Z2L7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.24■□□□□ 0.83
Crlf3Q9Z2L7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf3Q9Z2L7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf3Q9Z2L7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Crlf3Q9Z2L7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf3Q9Z2L7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf3Q9Z2L7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf3Q9Z2L7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Crlf3Q9Z2L7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf3Q9Z2L7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf3Q9Z2L7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Crlf3Q9Z2L7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf3Q9Z2L7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf3Q9Z2L7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf3Q9Z2L7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf3Q9Z2L7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf3Q9Z2L7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Crlf3Q9Z2L7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf3Q9Z2L7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.2■□□□□ 0.82
Crlf3Q9Z2L7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Crlf3Q9Z2L7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf3Q9Z2L7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.19■□□□□ 0.82
Crlf3Q9Z2L7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf3Q9Z2L7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.19■□□□□ 0.82
Crlf3Q9Z2L7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.19■□□□□ 0.82
Crlf3Q9Z2L7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Crlf3Q9Z2L7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crlf3Q9Z2L7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crlf3Q9Z2L7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Crlf3Q9Z2L7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.18■□□□□ 0.82
Crlf3Q9Z2L7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Crlf3Q9Z2L7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crlf3Q9Z2L7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.18■□□□□ 0.82
Crlf3Q9Z2L7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crlf3Q9Z2L7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Crlf3Q9Z2L7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Crlf3Q9Z2L7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Crlf3Q9Z2L7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.16■□□□□ 0.82
Crlf3Q9Z2L7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Crlf3Q9Z2L7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Crlf3Q9Z2L7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Crlf3Q9Z2L7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.15■□□□□ 0.82
Crlf3Q9Z2L7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms