Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Gm27502-201ENSMUST00000183495 199 ntBASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cx3cr1Q9Z0D9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Cx3cr1Q9Z0D9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cx3cr1Q9Z0D9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cx3cr1Q9Z0D9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cx3cr1Q9Z0D9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Gm7332-201ENSMUST00000118351 454 ntBASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cx3cr1Q9Z0D9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cr1Q9Z0D9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Cx3cr1Q9Z0D9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cr1Q9Z0D9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cr1Q9Z0D9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cr1Q9Z0D9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cx3cr1Q9Z0D9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cx3cr1Q9Z0D9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.98■□□□□ 0.31
Cx3cr1Q9Z0D9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cx3cr1Q9Z0D9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.96■□□□□ 0.31
Cx3cr1Q9Z0D9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cr1Q9Z0D9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cr1Q9Z0D9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cr1Q9Z0D9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cr1Q9Z0D9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cr1Q9Z0D9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cr1Q9Z0D9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cr1Q9Z0D9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cx3cr1Q9Z0D9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cx3cr1Q9Z0D9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cr1Q9Z0D9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cr1Q9Z0D9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cr1Q9Z0D9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cx3cr1Q9Z0D9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cr1Q9Z0D9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cr1Q9Z0D9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cr1Q9Z0D9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cr1Q9Z0D9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cr1Q9Z0D9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cr1Q9Z0D9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cr1Q9Z0D9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.94■□□□□ 0.3
Cx3cr1Q9Z0D9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cr1Q9Z0D9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cr1Q9Z0D9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms