Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.83■□□□□ 0.93
Clcn5Q9WVD4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn5Q9WVD4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn5Q9WVD4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Clcn5Q9WVD4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn5Q9WVD4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.83■□□□□ 0.93
Clcn5Q9WVD4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Clcn5Q9WVD4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn5Q9WVD4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn5Q9WVD4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.83■□□□□ 0.92
Clcn5Q9WVD4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.83■□□□□ 0.92
Clcn5Q9WVD4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn5Q9WVD4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn5Q9WVD4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Clcn5Q9WVD4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn5Q9WVD4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn5Q9WVD4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn5Q9WVD4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.82■□□□□ 0.92
Clcn5Q9WVD4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn5Q9WVD4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn5Q9WVD4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn5Q9WVD4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Clcn5Q9WVD4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn5Q9WVD4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn5Q9WVD4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Clcn5Q9WVD4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn5Q9WVD4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.81■□□□□ 0.92
Clcn5Q9WVD4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Clcn5Q9WVD4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn5Q9WVD4 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.81■□□□□ 0.92
Clcn5Q9WVD4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Clcn5Q9WVD4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn5Q9WVD4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.8■□□□□ 0.92
Clcn5Q9WVD4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.8■□□□□ 0.92
Clcn5Q9WVD4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn5Q9WVD4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Clcn5Q9WVD4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn5Q9WVD4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn5Q9WVD4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn5Q9WVD4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn5Q9WVD4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn5Q9WVD4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn5Q9WVD4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn5Q9WVD4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn5Q9WVD4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clcn5Q9WVD4 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn5Q9WVD4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Clcn5Q9WVD4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn5Q9WVD4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Clcn5Q9WVD4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn5Q9WVD4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Clcn5Q9WVD4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clcn5Q9WVD4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Clcn5Q9WVD4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn5Q9WVD4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn5Q9WVD4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.76■□□□□ 0.91
Clcn5Q9WVD4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn5Q9WVD4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Clcn5Q9WVD4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Spcs1-204ENSMUST00000226782 949 ntBASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.75■□□□□ 0.91
Clcn5Q9WVD4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn5Q9WVD4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Clcn5Q9WVD4 Gm18671-201ENSMUST00000214826 683 ntBASIC20.74■□□□□ 0.91
Clcn5Q9WVD4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn5Q9WVD4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms