Protein–RNA interactions for Protein: Q9WUK4

Rfc2, Replication factor C subunit 2, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc2Q9WUK4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc2Q9WUK4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc2Q9WUK4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.37■■□□□ 1.01
Rfc2Q9WUK4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.37■■□□□ 1.01
Rfc2Q9WUK4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Rfc2Q9WUK4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rfc2Q9WUK4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Rfc2Q9WUK4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.36■■□□□ 1.01
Rfc2Q9WUK4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rfc2Q9WUK4 Gm10602-201ENSMUST00000098239 609 ntBASIC21.36■■□□□ 1.01
Rfc2Q9WUK4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc2Q9WUK4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc2Q9WUK4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc2Q9WUK4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc2Q9WUK4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rfc2Q9WUK4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.35■■□□□ 1.01
Rfc2Q9WUK4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc2Q9WUK4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc2Q9WUK4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc2Q9WUK4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc2Q9WUK4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Rfc2Q9WUK4 Gm12933-201ENSMUST00000120203 872 ntBASIC21.34■■□□□ 1.01
Rfc2Q9WUK4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc2Q9WUK4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Rfc2Q9WUK4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc2Q9WUK4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc2Q9WUK4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.33■■□□□ 1.01
Rfc2Q9WUK4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc2Q9WUK4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.33■■□□□ 1.01
Rfc2Q9WUK4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.33■■□□□ 1.01
Rfc2Q9WUK4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.33■■□□□ 1.01
Rfc2Q9WUK4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc2Q9WUK4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc2Q9WUK4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rfc2Q9WUK4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rfc2Q9WUK4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rfc2Q9WUK4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rfc2Q9WUK4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc2Q9WUK4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rfc2Q9WUK4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc2Q9WUK4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc2Q9WUK4 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.32■■□□□ 1
Rfc2Q9WUK4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc2Q9WUK4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rfc2Q9WUK4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.3■■□□□ 1
Rfc2Q9WUK4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.3■■□□□ 1
Rfc2Q9WUK4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfc2Q9WUK4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc2Q9WUK4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfc2Q9WUK4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.29■■□□□ 1
Rfc2Q9WUK4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc2Q9WUK4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.29■■□□□ 1
Rfc2Q9WUK4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc2Q9WUK4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfc2Q9WUK4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rfc2Q9WUK4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.28■■□□□ 1
Rfc2Q9WUK4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.28■■□□□ 1
Rfc2Q9WUK4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc2Q9WUK4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc2Q9WUK4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc2Q9WUK4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc2Q9WUK4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rfc2Q9WUK4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfc2Q9WUK4 Mir6236-201ENSMUST00000184437 123 ntBASIC21.27■■□□□ 1
Rfc2Q9WUK4 Gm9988-201ENSMUST00000069786 435 ntBASIC21.27■■□□□ 1
Rfc2Q9WUK4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfc2Q9WUK4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rfc2Q9WUK4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfc2Q9WUK4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms