Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nubp1Q9R060 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp1Q9R060 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp1Q9R060 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp1Q9R060 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp1Q9R060 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp1Q9R060 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nubp1Q9R060 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.48■□□□□ 0.39
Nubp1Q9R060 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nubp1Q9R060 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nubp1Q9R060 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nubp1Q9R060 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nubp1Q9R060 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.47■□□□□ 0.39
Nubp1Q9R060 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.47■□□□□ 0.39
Nubp1Q9R060 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nubp1Q9R060 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nubp1Q9R060 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nubp1Q9R060 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.47■□□□□ 0.39
Nubp1Q9R060 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.46■□□□□ 0.39
Nubp1Q9R060 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nubp1Q9R060 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nubp1Q9R060 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.46■□□□□ 0.39
Nubp1Q9R060 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nubp1Q9R060 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nubp1Q9R060 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nubp1Q9R060 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.45■□□□□ 0.38
Nubp1Q9R060 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nubp1Q9R060 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nubp1Q9R060 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nubp1Q9R060 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Nubp1Q9R060 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nubp1Q9R060 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nubp1Q9R060 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.44■□□□□ 0.38
Nubp1Q9R060 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nubp1Q9R060 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nubp1Q9R060 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nubp1Q9R060 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nubp1Q9R060 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nubp1Q9R060 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nubp1Q9R060 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nubp1Q9R060 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.43■□□□□ 0.38
Nubp1Q9R060 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.43■□□□□ 0.38
Nubp1Q9R060 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.43■□□□□ 0.38
Nubp1Q9R060 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nubp1Q9R060 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Nubp1Q9R060 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nubp1Q9R060 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.42■□□□□ 0.38
Nubp1Q9R060 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nubp1Q9R060 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.42■□□□□ 0.38
Nubp1Q9R060 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nubp1Q9R060 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms