Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.35■■□□□ 1.49
Scn11aQ9R053 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scn11aQ9R053 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scn11aQ9R053 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scn11aQ9R053 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scn11aQ9R053 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Scn11aQ9R053 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Scn11aQ9R053 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Scn11aQ9R053 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC24.34■■□□□ 1.49
Scn11aQ9R053 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Scn11aQ9R053 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Scn11aQ9R053 Gm10493-201ENSMUST00000097270 612 ntBASIC24.34■■□□□ 1.49
Scn11aQ9R053 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Scn11aQ9R053 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Scn11aQ9R053 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Scn11aQ9R053 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Scn11aQ9R053 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Scn11aQ9R053 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Scn11aQ9R053 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.33■■□□□ 1.49
Scn11aQ9R053 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Scn11aQ9R053 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Scn11aQ9R053 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Scn11aQ9R053 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scn11aQ9R053 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scn11aQ9R053 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scn11aQ9R053 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Scn11aQ9R053 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Scn11aQ9R053 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Scn11aQ9R053 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Scn11aQ9R053 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Scn11aQ9R053 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.31■■□□□ 1.48
Scn11aQ9R053 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Scn11aQ9R053 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Scn11aQ9R053 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
Scn11aQ9R053 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Scn11aQ9R053 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Scn11aQ9R053 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Scn11aQ9R053 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Scn11aQ9R053 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Scn11aQ9R053 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.3■■□□□ 1.48
Scn11aQ9R053 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Scn11aQ9R053 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Scn11aQ9R053 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Scn11aQ9R053 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.29■■□□□ 1.48
Scn11aQ9R053 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Scn11aQ9R053 Mir6236-201ENSMUST00000184437 123 ntBASIC24.29■■□□□ 1.48
Scn11aQ9R053 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
Scn11aQ9R053 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Scn11aQ9R053 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Scn11aQ9R053 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Scn11aQ9R053 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scn11aQ9R053 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Scn11aQ9R053 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scn11aQ9R053 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scn11aQ9R053 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scn11aQ9R053 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scn11aQ9R053 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scn11aQ9R053 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC24.26■■□□□ 1.47
Scn11aQ9R053 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
Scn11aQ9R053 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Scn11aQ9R053 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Scn11aQ9R053 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Scn11aQ9R053 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Scn11aQ9R053 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Scn11aQ9R053 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Scn11aQ9R053 Gm11421-201ENSMUST00000122124 294 ntBASIC24.25■■□□□ 1.47
Scn11aQ9R053 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC24.25■■□□□ 1.47
Scn11aQ9R053 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Scn11aQ9R053 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Scn11aQ9R053 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.25■■□□□ 1.47
Scn11aQ9R053 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
Scn11aQ9R053 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scn11aQ9R053 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.24■■□□□ 1.47
Scn11aQ9R053 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scn11aQ9R053 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC24.24■■□□□ 1.47
Scn11aQ9R053 Gm43060-201ENSMUST00000200621 289 ntBASIC24.24■■□□□ 1.47
Scn11aQ9R053 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Scn11aQ9R053 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Scn11aQ9R053 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Scn11aQ9R053 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.23■■□□□ 1.47
Scn11aQ9R053 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.23■■□□□ 1.47
Scn11aQ9R053 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.23■■□□□ 1.47
Scn11aQ9R053 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scn11aQ9R053 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.22■■□□□ 1.47
Scn11aQ9R053 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Scn11aQ9R053 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Scn11aQ9R053 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scn11aQ9R053 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scn11aQ9R053 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Scn11aQ9R053 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC24.21■■□□□ 1.47
Scn11aQ9R053 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn11aQ9R053 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn11aQ9R053 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Scn11aQ9R053 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Scn11aQ9R053 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn11aQ9R053 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn11aQ9R053 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Scn11aQ9R053 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Scn11aQ9R053 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Scn11aQ9R053 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms