Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Msh5Q9QUM7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Msh5Q9QUM7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Msh5Q9QUM7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Msh5Q9QUM7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Msh5Q9QUM7 Gm40881-201ENSMUST00000223397 166 ntBASIC20.42■□□□□ 0.86
Msh5Q9QUM7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.42■□□□□ 0.86
Msh5Q9QUM7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh5Q9QUM7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.42■□□□□ 0.86
Msh5Q9QUM7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Gm9959-201ENSMUST00000068277 390 ntBASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh5Q9QUM7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Msh5Q9QUM7 Etf1-202ENSMUST00000180351 108 ntBASIC20.4■□□□□ 0.86
Msh5Q9QUM7 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.4■□□□□ 0.86
Msh5Q9QUM7 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.4■□□□□ 0.86
Msh5Q9QUM7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.4■□□□□ 0.86
Msh5Q9QUM7 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.4■□□□□ 0.86
Msh5Q9QUM7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh5Q9QUM7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh5Q9QUM7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Msh5Q9QUM7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Msh5Q9QUM7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Msh5Q9QUM7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh5Q9QUM7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Msh5Q9QUM7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh5Q9QUM7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh5Q9QUM7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh5Q9QUM7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh5Q9QUM7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh5Q9QUM7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh5Q9QUM7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Msh5Q9QUM7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Msh5Q9QUM7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.38■□□□□ 0.85
Msh5Q9QUM7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.38■□□□□ 0.85
Msh5Q9QUM7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh5Q9QUM7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh5Q9QUM7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh5Q9QUM7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Msh5Q9QUM7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh5Q9QUM7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh5Q9QUM7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh5Q9QUM7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Msh5Q9QUM7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Msh5Q9QUM7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.37■□□□□ 0.85
Msh5Q9QUM7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh5Q9QUM7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Msh5Q9QUM7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Msh5Q9QUM7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh5Q9QUM7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh5Q9QUM7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh5Q9QUM7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh5Q9QUM7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh5Q9QUM7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh5Q9QUM7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh5Q9QUM7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh5Q9QUM7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Msh5Q9QUM7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh5Q9QUM7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh5Q9QUM7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh5Q9QUM7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.35■□□□□ 0.85
Msh5Q9QUM7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh5Q9QUM7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.35■□□□□ 0.85
Msh5Q9QUM7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Msh5Q9QUM7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Msh5Q9QUM7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Msh5Q9QUM7 Gm7417-201ENSMUST00000192950 473 ntBASIC20.34■□□□□ 0.85
Msh5Q9QUM7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.34■□□□□ 0.85
Msh5Q9QUM7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh5Q9QUM7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Msh5Q9QUM7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh5Q9QUM7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh5Q9QUM7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh5Q9QUM7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.33■□□□□ 0.85
Msh5Q9QUM7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh5Q9QUM7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Msh5Q9QUM7 Gm14117-201ENSMUST00000122417 843 ntBASIC20.33■□□□□ 0.85
Msh5Q9QUM7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.33■□□□□ 0.85
Msh5Q9QUM7 Rps24-207ENSMUST00000224568 714 ntBASIC20.33■□□□□ 0.85
Msh5Q9QUM7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Msh5Q9QUM7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Msh5Q9QUM7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.32■□□□□ 0.84
Msh5Q9QUM7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.32■□□□□ 0.84
Msh5Q9QUM7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh5Q9QUM7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Msh5Q9QUM7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.32■□□□□ 0.84
Msh5Q9QUM7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh5Q9QUM7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh5Q9QUM7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Msh5Q9QUM7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Msh5Q9QUM7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh5Q9QUM7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Msh5Q9QUM7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms