Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tlr4Q9QUK6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tlr4Q9QUK6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.74■□□□□ 0.75
Tlr4Q9QUK6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tlr4Q9QUK6 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.74■□□□□ 0.75
Tlr4Q9QUK6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tlr4Q9QUK6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tlr4Q9QUK6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tlr4Q9QUK6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Tlr4Q9QUK6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr4Q9QUK6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Tlr4Q9QUK6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tlr4Q9QUK6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr4Q9QUK6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.72■□□□□ 0.75
Tlr4Q9QUK6 Gm8493-201ENSMUST00000196881 489 ntBASIC19.72■□□□□ 0.75
Tlr4Q9QUK6 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.72■□□□□ 0.75
Tlr4Q9QUK6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr4Q9QUK6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
Tlr4Q9QUK6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr4Q9QUK6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Gm43017-201ENSMUST00000198296 752 ntBASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr4Q9QUK6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Gm12251-201ENSMUST00000117893 792 ntBASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr4Q9QUK6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr4Q9QUK6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr4Q9QUK6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.68■□□□□ 0.74
Tlr4Q9QUK6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Tlr4Q9QUK6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tlr4Q9QUK6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr4Q9QUK6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr4Q9QUK6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr4Q9QUK6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr4Q9QUK6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr4Q9QUK6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr4Q9QUK6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr4Q9QUK6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Tlr4Q9QUK6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.67■□□□□ 0.74
Tlr4Q9QUK6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.67■□□□□ 0.74
Tlr4Q9QUK6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr4Q9QUK6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tlr4Q9QUK6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr4Q9QUK6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr4Q9QUK6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr4Q9QUK6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr4Q9QUK6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Tlr4Q9QUK6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr4Q9QUK6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr4Q9QUK6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tlr4Q9QUK6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr4Q9QUK6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms