Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud2Q9JJC9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Herpud2Q9JJC9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Herpud2Q9JJC9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Herpud2Q9JJC9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Herpud2Q9JJC9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Herpud2Q9JJC9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Herpud2Q9JJC9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Herpud2Q9JJC9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.13■□□□□ 0.81
Herpud2Q9JJC9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.13■□□□□ 0.81
Herpud2Q9JJC9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud2Q9JJC9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Herpud2Q9JJC9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Herpud2Q9JJC9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Herpud2Q9JJC9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Herpud2Q9JJC9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Herpud2Q9JJC9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Herpud2Q9JJC9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Herpud2Q9JJC9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Gm42642-201ENSMUST00000200683 355 ntBASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Herpud2Q9JJC9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herpud2Q9JJC9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Gm42569-201ENSMUST00000200539 472 ntBASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herpud2Q9JJC9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Herpud2Q9JJC9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Herpud2Q9JJC9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Herpud2Q9JJC9 Gm7291-201ENSMUST00000199147 382 ntBASIC20.07■□□□□ 0.8
Herpud2Q9JJC9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.07■□□□□ 0.8
Herpud2Q9JJC9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Herpud2Q9JJC9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herpud2Q9JJC9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herpud2Q9JJC9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herpud2Q9JJC9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Herpud2Q9JJC9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herpud2Q9JJC9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Herpud2Q9JJC9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herpud2Q9JJC9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herpud2Q9JJC9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Herpud2Q9JJC9 Gm27405-201ENSMUST00000184201 112 ntBASIC20.05■□□□□ 0.8
Herpud2Q9JJC9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms