Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zc3h8Q9JJ48 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Zc3h8Q9JJ48 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zc3h8Q9JJ48 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Zc3h8Q9JJ48 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zc3h8Q9JJ48 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h8Q9JJ48 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Zc3h8Q9JJ48 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Zc3h8Q9JJ48 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3h8Q9JJ48 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3h8Q9JJ48 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.67■□□□□ 0.58
Zc3h8Q9JJ48 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3h8Q9JJ48 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Zc3h8Q9JJ48 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3h8Q9JJ48 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h8Q9JJ48 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3h8Q9JJ48 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3h8Q9JJ48 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3h8Q9JJ48 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3h8Q9JJ48 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Zc3h8Q9JJ48 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Zc3h8Q9JJ48 Mir6236-201ENSMUST00000184437 123 ntBASIC18.65■□□□□ 0.58
Zc3h8Q9JJ48 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3h8Q9JJ48 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Zc3h8Q9JJ48 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Zc3h8Q9JJ48 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h8Q9JJ48 Mir7075-201ENSMUST00000184187 82 ntBASIC18.64■□□□□ 0.57
Zc3h8Q9JJ48 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h8Q9JJ48 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Zc3h8Q9JJ48 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h8Q9JJ48 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h8Q9JJ48 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h8Q9JJ48 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h8Q9JJ48 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Zc3h8Q9JJ48 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h8Q9JJ48 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.63■□□□□ 0.57
Zc3h8Q9JJ48 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Zc3h8Q9JJ48 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Zc3h8Q9JJ48 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h8Q9JJ48 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h8Q9JJ48 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h8Q9JJ48 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h8Q9JJ48 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h8Q9JJ48 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Zc3h8Q9JJ48 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h8Q9JJ48 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Zc3h8Q9JJ48 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.62■□□□□ 0.57
Zc3h8Q9JJ48 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h8Q9JJ48 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h8Q9JJ48 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Zc3h8Q9JJ48 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3h8Q9JJ48 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3h8Q9JJ48 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Zc3h8Q9JJ48 Gm6139-201ENSMUST00000079261 882 ntBASIC18.61■□□□□ 0.57
Zc3h8Q9JJ48 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3h8Q9JJ48 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3h8Q9JJ48 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Gm12251-201ENSMUST00000117893 792 ntBASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms