Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rhox4bQ9JI43 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4bQ9JI43 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4bQ9JI43 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4bQ9JI43 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Gm7432-201ENSMUST00000210343 879 ntBASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4bQ9JI43 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Gm11599-201ENSMUST00000118720 878 ntBASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4bQ9JI43 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4bQ9JI43 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4bQ9JI43 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4bQ9JI43 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rhox4bQ9JI43 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rhox4bQ9JI43 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rhox4bQ9JI43 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rhox4bQ9JI43 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms