Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ClpxQ9JHS4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ClpxQ9JHS4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ClpxQ9JHS4 Gm15820-201ENSMUST00000201566 728 ntBASIC18.27■□□□□ 0.52
ClpxQ9JHS4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ClpxQ9JHS4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ClpxQ9JHS4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ClpxQ9JHS4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClpxQ9JHS4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClpxQ9JHS4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.26■□□□□ 0.51
ClpxQ9JHS4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.26■□□□□ 0.51
ClpxQ9JHS4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClpxQ9JHS4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ClpxQ9JHS4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClpxQ9JHS4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ClpxQ9JHS4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ClpxQ9JHS4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.25■□□□□ 0.51
ClpxQ9JHS4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.25■□□□□ 0.51
ClpxQ9JHS4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ClpxQ9JHS4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ClpxQ9JHS4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClpxQ9JHS4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClpxQ9JHS4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.23■□□□□ 0.51
ClpxQ9JHS4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClpxQ9JHS4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClpxQ9JHS4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClpxQ9JHS4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ClpxQ9JHS4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ClpxQ9JHS4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClpxQ9JHS4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClpxQ9JHS4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClpxQ9JHS4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ClpxQ9JHS4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ClpxQ9JHS4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ClpxQ9JHS4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClpxQ9JHS4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ClpxQ9JHS4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Gm10232-201ENSMUST00000089221 720 ntBASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ClpxQ9JHS4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClpxQ9JHS4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ClpxQ9JHS4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms