Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.22■□□□□ 0.67
Ube4bQ9ES00 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.22■□□□□ 0.67
Ube4bQ9ES00 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4bQ9ES00 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4bQ9ES00 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4bQ9ES00 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.21■□□□□ 0.67
Ube4bQ9ES00 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4bQ9ES00 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4bQ9ES00 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4bQ9ES00 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4bQ9ES00 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4bQ9ES00 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4bQ9ES00 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4bQ9ES00 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4bQ9ES00 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.2■□□□□ 0.66
Ube4bQ9ES00 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4bQ9ES00 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4bQ9ES00 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4bQ9ES00 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4bQ9ES00 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ube4bQ9ES00 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4bQ9ES00 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.19■□□□□ 0.66
Ube4bQ9ES00 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4bQ9ES00 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4bQ9ES00 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4bQ9ES00 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4bQ9ES00 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4bQ9ES00 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ube4bQ9ES00 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4bQ9ES00 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4bQ9ES00 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4bQ9ES00 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube4bQ9ES00 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ube4bQ9ES00 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ube4bQ9ES00 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ube4bQ9ES00 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ube4bQ9ES00 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.14■□□□□ 0.65
Ube4bQ9ES00 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4bQ9ES00 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ube4bQ9ES00 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4bQ9ES00 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4bQ9ES00 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.13■□□□□ 0.65
Ube4bQ9ES00 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ube4bQ9ES00 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms