Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps35Q9EQH3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Vps35Q9EQH3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vps35Q9EQH3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps35Q9EQH3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Vps35Q9EQH3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps35Q9EQH3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps35Q9EQH3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps35Q9EQH3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps35Q9EQH3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.06■□□□□ 0.8
Vps35Q9EQH3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.06■□□□□ 0.8
Vps35Q9EQH3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps35Q9EQH3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps35Q9EQH3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps35Q9EQH3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps35Q9EQH3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps35Q9EQH3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps35Q9EQH3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps35Q9EQH3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps35Q9EQH3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps35Q9EQH3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vps35Q9EQH3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vps35Q9EQH3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.04■□□□□ 0.8
Vps35Q9EQH3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Vps35Q9EQH3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Vps35Q9EQH3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vps35Q9EQH3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps35Q9EQH3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps35Q9EQH3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps35Q9EQH3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps35Q9EQH3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps35Q9EQH3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps35Q9EQH3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps35Q9EQH3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Vps35Q9EQH3 Gm43530-201ENSMUST00000195920 274 ntBASIC20.03■□□□□ 0.8
Vps35Q9EQH3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.03■□□□□ 0.8
Vps35Q9EQH3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps35Q9EQH3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps35Q9EQH3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps35Q9EQH3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Vps35Q9EQH3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps35Q9EQH3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps35Q9EQH3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vps35Q9EQH3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps35Q9EQH3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Vps35Q9EQH3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps35Q9EQH3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps35Q9EQH3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps35Q9EQH3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Vps35Q9EQH3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps35Q9EQH3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Vps35Q9EQH3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vps35Q9EQH3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps35Q9EQH3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20■□□□□ 0.79
Vps35Q9EQH3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20■□□□□ 0.79
Vps35Q9EQH3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps35Q9EQH3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20■□□□□ 0.79
Vps35Q9EQH3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Gm21956-201ENSMUST00000179946 522 ntBASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps35Q9EQH3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.98■□□□□ 0.79
Vps35Q9EQH3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps35Q9EQH3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps35Q9EQH3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps35Q9EQH3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vps35Q9EQH3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps35Q9EQH3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms