Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Chmp2aQ9DB34 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp2aQ9DB34 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.91■□□□□ 0.94
Chmp2aQ9DB34 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.91■□□□□ 0.94
Chmp2aQ9DB34 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.91■□□□□ 0.94
Chmp2aQ9DB34 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp2aQ9DB34 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2aQ9DB34 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.9■□□□□ 0.94
Chmp2aQ9DB34 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2aQ9DB34 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.9■□□□□ 0.94
Chmp2aQ9DB34 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.9■□□□□ 0.94
Chmp2aQ9DB34 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2aQ9DB34 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Chmp2aQ9DB34 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2aQ9DB34 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp2aQ9DB34 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp2aQ9DB34 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp2aQ9DB34 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp2aQ9DB34 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 Gm43530-201ENSMUST00000195920 274 ntBASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Chmp2aQ9DB34 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Chmp2aQ9DB34 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2aQ9DB34 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2aQ9DB34 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2aQ9DB34 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2aQ9DB34 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2aQ9DB34 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2aQ9DB34 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp2aQ9DB34 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2aQ9DB34 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Chmp2aQ9DB34 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Chmp2aQ9DB34 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2aQ9DB34 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2aQ9DB34 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2aQ9DB34 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.86■□□□□ 0.93
Chmp2aQ9DB34 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2aQ9DB34 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp2aQ9DB34 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp2aQ9DB34 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.84■□□□□ 0.93
Chmp2aQ9DB34 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Chmp2aQ9DB34 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp2aQ9DB34 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp2aQ9DB34 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp2aQ9DB34 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp2aQ9DB34 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms